Module Package description
ImageMagick/6.9.2 This module loads the ImageMagick Version 6.9.2 package compiled with GNU compiler 4.9.3. It will place the ImageMagick executables in your PATH. See http://www.imagemagick.org/ for details.
METv4.0/4.0 This module loads the METv4.0 package compiled with the Intel compiler. See http://www.dtcenter.org/met/users/docs/overview.php for details.
Panoply/3.1.7 This module loads the Panoply Version 3.1.7 package. It will place the Panoply files in your PATH. See http://www.giss.nasa.gov/tools/panoply/ for details.
Panoply/4.0.3 This module loads the Panoply 4.0.3 Java package. To execute, ensure that you have enabled X forwarding or started a VNC session. Then run "panoply.sh" from your command line. See http://www.giss.nasa.gov/tools/panoply/ for more information.
R/2.15.2 This module loads the R Version 2.15.2 compiled with Intel compiler 12.1.5. It uses the BLAS libraries from the Intel Math Kernel Libraries for improved performance. It will put the R executables in your PATH. This version of R is compiled with "-mieee-fp" and it passes all tests of "make check." However, this version might be slower than the optimized version that is compiled without "-mieee-fp." That optimized version is available via the R/2.15.2.opt module. See www.r-project.org for details.
R/2.15.2.opt This module loads the R Version 2.15.2 package compiled with Intel compiler 12.1.5. It uses the BLAS libraries from the Intel Math Kernel Libraries for improved performance. It will put the R executables in your PATH. This version of R is compiled without "-mieee-fp" and consequently does not pass all "make check" tests." However, it may be faster than the strict version. A strict R version that is compiled with "-mieee-fp" is available via the R/2.15.2 module. See www.r-project.org for details.
R/2.15.2.rmpi This module loads the R Version 2.15.2 package compiled with Intel compiler 12.1.5 and supports Rmpi library. It will put the R executables in your PATH. See www.r-project.org for details.
R/3.0.1 This module loads the R Version 3.0.1 compiled with Intel compiler 12.1.5. It uses the BLAS libraries from the Intel Math Kernel Libraries for improved performance. It will put the R executables in your PATH.
R/3.0.1.shared This module loads the R Version 3.0.1 compiled with Intel compiler 12.1.5. It uses the BLAS libraries from the Intel Math Kernel Libraries for improved performance. It will put the R executables in your PATH. Use this shared version if you will be compiling against R (compiling the R-python bindings, for example) rather than using R alone.
R/3.1.0 This module loads the R Version 3.1.0 package compiled with Intel compiler 3.1.0. It uses the BLAS libraries from the Intel Math Kernel Libraries for improved performance. It will put the R executables in your PATH. This version of R is compiled without "-mieee-fp" and consequently does not pass all "make check" tests. However, it may be faster than the strict version. A strict R version that is compiled with "-mieee-fp" is available via the R/3.1.0 module. See www.r-project.org for details.
R/3.2.1 This module loads the R Version 3.2.1 package compiled with Intel compiler 15.0.3. It uses the BLAS libraries from the Intel Math Kernel Libraries for improved performance. It will put the R executables in your PATH. This version of R is compiled without "-mieee-fp" and consequently does not pass all "make check" tests. However, it may be faster than the strict version. A strict R version that is compiled with "-mieee-fp" is available via the R/3.1.0 module. See www.r-project.org for details.
R/3.2.2 This module loads the R Version 3.2.2 package compiled with Intel compiler 16.0.0. It uses the BLAS libraries from the Intel Math Kernel Libraries for improved performance. It will put the R executables in your PATH. This version of R is compiled without "-mieee-fp" and consequently does not pass all "make check" tests. However, it may be faster than the strict version. A strict R version that is compiled with "-mieee-fp" is available via the R/3.1.0 module. See www.r-project.org for details.
R/3.2.2.rmpi This module loads the R Version 3.2.2 package compiled with Intel compiler 16.0.0. It uses the BLAS libraries from the Intel Math Kernel Libraries for improved performance. It will put the R executables in your PATH. Use this module if you wish to use RMPI. This version of R is compiled without "-mieee-fp" and consequently does not pass all "make check" tests. However, it may be faster than the strict version. A strict R version that is compiled with "-mieee-fp" is available via the R/3.1.0 module. See www.r-project.org for details.
R/3.3.2 R is 'GNU S', a freely available language and environment for statistical computing and graphics which provides a wide variety of statistical and graphical techniques: linear and nonlinear modelling, statistical tests, time series analysis, classification, clustering, etc. Software website - https://cran.r-project.org/ Built on Mon Jul 10 22:03:45 MDT 2017 Modules used: ncarenv/1.0 intel/16.0.3 ncarbinlibs/1.1 ncarcompilers/1.0
allinea/4.2.1 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module if you run the native client as described in the CISL documentation at https://www2.cisl.ucar.edu/resources/yellowstone/code_dev/debugging_ddt . See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/4.2.1-38721 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module if you run the native client as described in the CISL documentation at https://www2.cisl.ucar.edu/resources/yellowstone/code_dev/debugging_ddt . See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/4.2.2-39005 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module if you run the native client as described in the CISL documentation at https://www2.cisl.ucar.edu/resources/yellowstone/code_dev/debugging_ddt . See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/4.2.2-39982 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module if you run the native client as described in the CISL documentation at https://www2.cisl.ucar.edu/resources/yellowstone/code_dev/debugging_ddt . See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/5.0-40810 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module if you run the native client as described in the CISL documentation at https://www2.cisl.ucar.edu/resources/yellowstone/code_dev/debugging_ddt . See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/5.0.1 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module if you run the native client as described in the CISL documentation at https://www2.cisl.ucar.edu/resources/yellowstone/code_dev/debugging_ddt . See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/5.1-43629 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module if you run the native client as described in the CISL documentation at https://www2.cisl.ucar.edu/resources/yellowstone/code_dev/debugging_ddt . See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/6.0.2 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module to run the native client as described in "Running Allinea DDT, MAP and PR jobs" on the CISL website. See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/6.0.4 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module to run the native client as described in "Running Allinea DDT, MAP and PR jobs" on the CISL website. See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/6.1.2 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module to run the native client as described in "Running Allinea DDT, MAP and PR jobs" on the CISL website. See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/7.0 This module allows you to run Allinea's DDT debugger and MAP profiling tools. You do not need to load the module to run the native client as described in "Running Allinea DDT, MAP and PR jobs" on the CISL website. See http://www.allinea.com/products/ddt and http://www.allinea.com/products/map for details.
allinea/7.0.4 Allinea Forge is the cross-platform tool suite for software development - with everything needed to debug, profile and optimize C, C++ and Fortran/F90 applications on Linux for high performance Software website - https://www.allinea.com/products/develop-allinea-forge Built on Wed Jun 7 16:28:23 MDT 2017 Modules used: ncarenv/1.0 intel/12.1.5 ncarbinlibs/1.1 impi/4.0.3.008
allinea/pr-4.2 This module allows you to run Allinea's Performance Reports. See http://www.allinea.com/products/performance-reports for details.
allinea/pr-5.0-40810 This module allows you to run Allinea's Performance Reports. See http://www.allinea.com/products/performance-reports for details.
allinea/pr-5.0.1 This module allows you to run Allinea's Performance Reports. See http://www.allinea.com/products/performance-reports for details.
allinea/pr-5.1-43629 This module allows you to run Allinea's Performance Reports. See http://www.allinea.com/products/performance-reports for details.
allinea/pr-6.0.2 This module allows you to run Allinea's Performance Reports. See http://www.allinea.com/products/performance-reports for details.
allinea/pr-6.0.4 This module allows you to run Allinea's Performance Reports. See http://www.allinea.com/products/performance-reports for details.
allinea/pr-7.0 This module allows you to run Allinea's Performance Reports. See http://www.allinea.com/products/performance-reports for details.
allinea/pr-7.0.4 Allinea Performance Reports are the most effective way to characterize and understand the performance of HPC application runs. Software website - https://www.allinea.com/products/allinea-performance-reports Built on Wed Jun 7 16:29:10 MDT 2017 Modules used: ncarenv/1.0 intel/12.1.5 ncarbinlibs/1.1 impi/4.0.3.008
antlr/2.7.7 This module loads the ANTLR Version 2.7.7 package. It will place the ANTLR executables in your PATH. See http://antlr.org/ for details.
cdo/1.5.5 This module loads the CDO Version 1.5.5 package. It will place the CDO executables in your PATH. See https://code.zmaw.de/projects/cdo for more information.
cdo/1.5.6.1 This module loads the CDO Version 1.5.6.1 package. It will place the CDO executables in your PATH. See https://code.zmaw.de/projects/cdo for more information.
cdo/1.6.1 This module loads the CDO Version 1.6.1 package. It will place the CDO executables in your PATH. See https://code.zmaw.de/projects/cdo for more information.
cdo/1.6.3 This module loads the CDO Version 1.6.3 package. It will place the CDO executables in your PATH. See https://code.zmaw.de/projects/cdo for more information.
cdo/1.7.2 CDO is a collection of command line operators to manipulate and analyze climate and NWP model data. Supported data formats are GRIB 1/2, netCDF 3/4, SERVICE, EXTRA and IEG. Software website - https://code.zmaw.de/projects/cdo Built on Tue Feb 14 09:37:27 MST 2017 Modules used: gnu/6.1.0 netcdf/4.4.1
cmake/2.8.10.2 This module loads cmake version 2.8.10.2 compiled with the GNU compiler. See http://www.cmake.org/ for details.
cmake/2.8.12.2 This module loads cmake version 2.8.12.2 compiled with the GNU compiler. See http://www.cmake.org/ for details.
cmake/3.0.2 This module loads cmake version 3.0.2 compiled with the GNU compiler. See http://www.cmake.org/ for details.
cmake/3.3.1 This module loads cmake version 3.3.1 compiled with the GNU compiler. See http://www.cmake.org/ for details.
cmake/3.6.2 This module loads cmake version 3.6.2 compiled with the GNU compiler. See http://www.cmake.org/ for details.
ddd/3.3.12 This module loads the Data Display Debugger (ddd) version 3.3.12. The GNU DDD is a graphical front-end for command-line debuggers such as GDB, DBX, WDB, Ladebug, JDB, XDB, the Perl debugger, the bash debugger bashdb, the GNU Make debugger remake, or the Python debugger pydb. Besides ``usual'' front-end features such as viewing source texts, DDD has become famous through its interactive graphical data display, where data structures are displayed as graphs. For more information see: http://www.gnu.org/software/ddd/
debug/0.0 This module adds debug flags (for example, -g) to your compilers. It also includes bounds-checking, which may be a problem when you compile certain CESM cases. Rather than use this module in such cases, set your preferred compiler options in the appropriate option-setting line in the file named "Module" in your CESM case directory. Do this after you have configured your case but before you run the build script.
disable-darshan This module disable the darshan HPC I/O characterization tool, which by default is always enabled. See http://www.mcs.anl.gov/research/projects/darshan/ for details.
doxygen/1.8.12 This module loads doxygen v1.8.12
emacs/24.5 emacs editor version 24.5 built with the gnu compiler 4.8.2.
ferret/6.84 This module loads the Ferret Version 6.84 package and sets the required environment variables. See http://ferret.wrc.noaa.gov/Ferret/ for details.
ferret/6.96 This module loads the Ferret Version 6.96 package and sets the required environment variables. See http://ferret.wrc.noaa.gov/Ferret/ for details.
ferret/7.0 This module loads the Ferret Version 7.0 package and sets the required environment variables. See http://ferret.wrc.noaa.gov/Ferret/ for details.
fftw/3.3.2 This module loads the FFTW Version 3.3.2 package. It will place the FFTW executables in your PATH, and also update these environment variables: INC_NCAR: - Will add the correct include path flags for the FFTW headers and module files. LIB_NCAR: - Will add the correct link and rpath commands to use the FFTW shared libraries in your programs. See http://www.fftw.org/fftw3_doc/ for details.
fftw/3.3.4 This module loads the FFTW Version 3.3.4 package. It will place the FFTW executables in your PATH, and also update these environment variables: INC_NCAR: - Will add the correct include path flags for the FFTW headers and module files. LIB_NCAR: - Will add the correct link and rpath commands to use the FFTW shared libraries in your programs. See http://www.fftw.org/fftw3_doc/ for details.
ftools/1.0 This module loads the ftools version 1.0 package.
git-svn/1.8.11.0 This module loads the Alien/SVN Perl library needed by Git-SVN. See http://search.cpan.org/~mschwern/Alien-SVN-v1.8.11.0/ for details.
git/1.7.1 This module loads the git version 1.7.1 See http://github.com/git/git/ for details
git/2.10.0 This module loads the git version 2.10.0 See http://github.com/git/git/ for details
git/2.3.0 This module loads the git version 2.3.0 See http://github.com/git/git/ for details
gmake/4.1 This module loads the GNU make version 4.1 See http://www.gnu.org/software/make/ for details
gnuplot/4.6.1 This module loads the gnuplot version 4.6.1 package. It will place the gnuplot executables in your PATH. See http://gnuplot.info/ for details.
gnuplot/5.0.4 This module loads the gnuplot version 5.0.4 package. It will place the gnuplot executables in your PATH. See http://gnuplot.info/ for details.
grads/2.0.2 This module loads version 2.0.2 of the Grid Analysis and Display System (GrADS). GrADS is an interactive desktop tool that is used for easy access, manipulation, and visualization of earth science data. Use of GrADS on this system requires that X11 forwarding be enabled (i.e., that you connected using the ssh -X flag). See http://cola.gmu.edu/grads/ for more information.
grads/2.1.0 This module loads version 2.1.0 of the Grid Analysis and Display System (GrADS). GrADS is an interactive desktop tool that is used for easy access, manipulation, and visualization of earth science data. Use of GrADS on this system requires that X11 forwarding be enabled (i.e., that you connected using the ssh -X flag). See http://cola.gmu.edu/grads/ for more information.
grads/2.1.1.b0 The Grid Analysis and Display System (GrADS) is an interactive desktop tool that is used for easy access, manipulation, and visualization of earth science data. Software website - http://cola.gmu.edu/grads/ Built on Tue May 23 11:04:05 MDT 2017 Modules used: ncarenv/1.0
graphviz/2.40.1 Graph visualization is a way of representing structural information as diagrams of abstract graphs and networks. It has important applications in networking, bioinformatics, software engineering, database and web design, machine learning, and in visual interfaces for other technical domains. Software website - http://www.graphviz.org/ Built on Mon Feb 6 19:20:44 MST 2017 Modules used: gnu/4.8.2
gsl/1.15 This module loads the GSL Version 1.15 package. It will place the GSL executables in your PATH, and also update these environment variables: INC_NCAR: - Will add the correct include path flags for the GSL header files. LIB_NCAR: - Will add the correct link and rpath commands to use the GSL shared libraries in your programs. See http://www.gnu.org/software/gsl/ for details.
gsl/1.16 This module loads the GSL package and will place the GSL executables in your PATH. It will also update these environment variables: INC_NCAR: Will add the correct include path flags for the GSL header files. LIB_NCAR: Will add the correct link and rpath commands to use the GSL shared libraries in your programs. See http://www.gnu.org/software/gsl/ for details.
hwloc/1.5 This module loads the hwloc version 1.5 package. It will place the hwloc executables in your PATH. See http://www.open-mpi.org/projects/hwloc/ for details.
idl/8.2.1 This module loads the IDL Version 8.2.1 package. It will place the IDL executables in your PATH. See http://www.harrisgeospatial.com/docs/home.html for details.
idl/8.2.3 This module loads the IDL Version 8.2.3 package. It will place the IDL executables in your PATH. See http://www.harrisgeospatial.com/docs/home.html for details.
idl/8.4.1 This module loads the IDL Version 8.4.1 package. It will place the IDL executables in your PATH. See http://www.harrisgeospatial.com/docs/home.html for details.
java/1.7.0 This module loads the icedtea-openjdk 2.3.14 package compiled with GNU compiler 4.4.7. This includes jdk-1.6.0. It will place the java executables in your PATH. See http://icedtea.classpath.org/ for details.
java/1.8.0 This module loads the Oracle jdk 1.8.0 u66. See http://www.oracle.com/technetwork/java/javase/downloads/jdk8-downloads-2133151.html for details.
job_memusage/1.0 This module loads the job_memusage tool version 1.0. Use it like this: - sequential: job_memusage.exe program_name - parallel batch jobs: mpirun.lsf job_memusage.exe program_name See "Checking memory use" in the Yellowstone documentation: https://www2.cisl.ucar.edu/resources/yellowstone/using_resources/runningjobs/check_memory
joe/4.1 joe 4.1 built with the gnu compiler 4.8.2.
julia/0.3.10 This module loads the Julia 0.3.10 package. It will place the Julia executables in your PATH, and also update the environment variables. Julia is a high-level, high-performance dynamic programming language for technical computing, with syntax that is familiar to users of other technical computing environments. It provides a sophisticated compiler, distributed parallel execution, numerical accuracy, and an extensive mathematical function library. Julia’s Base library, largely written in Julia itself, also integrates mature, best-of-breed open source C and Fortran libraries for linear algebra, random number generation, signal processing, and string processing. See http://julialang.org/ for more information.
julia/0.4.5 This module loads the Julia 0.4.5 package. It will place the Julia executables in your PATH, and also update the environment variables. Julia is a high-level, high-performance dynamic programming language for technical computing, with syntax that is familiar to users of other technical computing environments. It provides a sophisticated compiler, distributed parallel execution, numerical accuracy, and an extensive mathematical function library. Julia Base library, largely written in Julia itself, also integrates mature, best-of-breed open source C and Fortran libraries for linear algebra, random number generation, signal processing, and string processing. See http://julialang.org/ for more information.
julia/0.4.6 This module loads the Julia 0.4.6 package. It will place the Julia executables in your PATH, and also update the environment variables. Julia is a high-level, high-performance dynamic programming language for technical computing, with syntax that is familiar to users of other technical computing environments. It provides a sophisticated compiler, distributed parallel execution, numerical accuracy, and an extensive mathematical function library. Julia Base library, largely written in Julia itself, also integrates mature, best-of-breed open source C and Fortran libraries for linear algebra, random number generation, signal processing, and string processing. See http://julialang.org/ for more information.
julia/0.5.0 This module loads the Julia 0.5.0 package. It will place the Julia executables in your PATH, and also update the environment variables. Julia is a high-level, high-performance dynamic programming language for technical computing, with syntax that is familiar to users of other technical computing environments. It provides a sophisticated compiler, distributed parallel execution, numerical accuracy, and an extensive mathematical function library. Julia Base library, largely written in Julia itself, also integrates mature, best-of-breed open source C and Fortran libraries for linear algebra, random number generation, signal processing, and string processing. See http://julialang.org/ for more information.
jython/2.5.3 This module loads the Jython package. Jython is a compliant alternative implementation of the Python language, running on the Java VM. You need to have a valid java executable in your PATH to run jython. See http://www.jython.org/ for details.
jython/2.7-beta1 This module loads the Jython package. Jython is a compliant alternative implementation of the Python language, running on the Java VM. You need to have a valid java executable in your PATH to run jython. See http://www.jython.org/ for details.
lapack/3.2.1 LAPACK libraries. WARNING: this build has not been optimized for yellowstone. Usage of MKL is instead recommended. See http://www.netlib.org/lapack/ for details.
libxml2/2.9.0 libxml2
mathematica/10.4.1 This module makes Mathematica available to you. Advanced visualization applications such as Mathematica should be launched by TurboVNC on the Geyser and Caldera clusters. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.wolfram.com/mathematica/ for details.
mathematica/9.0 This module makes Mathematica Version 9.0 available to you. Advanced visualization applications such as Mathematica should be launched by TurboVNC on the Geyser and Caldera clusters. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.wolfram.com/mathematica/ for details.
matlab/R2012b This module makes MATLAB Version R2012b available to you and sets your MATLABPATH environment variable accordingly. You may execute any of the scripts in the $MATLABPATH directory with no special action required. Advanced visualization applications such as MATLAB should be launched by TurboVNC on the Geyser and Caldera clusters. You can add the appropriate mexnc and snctools toolboxes by running "ncstartup" from the MATLAB command line. To add the m_map toolbox, run "m_map_startup." To add the deprecated, unsupported netcdf_toolbox, run "old_netcdf_startup" from the MATLAB command line. Use it at your own risk and start migrating to the new, supported, native netcdf interface. See http://www.mathworks.com/products/matlab/ for details.
matlab/R2013a This module makes MATLAB Version R2013a available to you and sets your MATLABPATH environment variable accordingly. You may execute any of the scripts in the $MATLABPATH directory with no special action required. Advanced visualization applications such as MATLAB should be launched by TurboVNC on the Geyser and Caldera clusters. You can add the appropriate mexnc and snctools toolboxes by running "ncstartup" from the MATLAB command line. To add the m_map toolbox, run "m_map_startup." To add the deprecated, unsupported netcdf_toolbox, run "old_netcdf_startup" from the MATLAB command line. Use it at your own risk and start migrating to the new, supported, native netcdf interface. See http://www.mathworks.com/products/matlab/ for details.
matlab/R2013b This module makes MATLAB Version R2013b available to you and sets your MATLABPATH environment variable accordingly. You may execute any of the scripts in the $MATLABPATH directory with no special action required. Advanced visualization applications such as MATLAB should be launched by TurboVNC on the Geyser and Caldera clusters. You can add the appropriate mexnc and snctools toolboxes by running "ncstartup" from the MATLAB command line. To add the m_map toolbox, run "m_map_startup." To add the deprecated, unsupported netcdf_toolbox, run "old_netcdf_startup" from the MATLAB command line. Use it at your own risk and start migrating to the new, supported, native netcdf interface. See http://www.mathworks.com/products/matlab/ for details.
matlab/R2014a This module makes MATLAB Version R2014a available to you and sets your MATLABPATH environment variable accordingly. You may execute any of the scripts in the $MATLABPATH directory with no special action required. Advanced visualization applications such as MATLAB should be launched by TurboVNC on the Geyser and Caldera clusters. You can add the appropriate mexnc and snctools toolboxes by running "ncstartup" from the MATLAB command line. To add the m_map toolbox, run "m_map_startup." To add the deprecated, unsupported netcdf_toolbox, run "old_netcdf_startup" from the MATLAB command line. Use it at your own risk and start migrating to the new, supported, native netcdf interface. See http://www.mathworks.com/products/matlab/ for details.
matlab/R2014b This module makes MATLAB Version R2014b available to you and sets your MATLABPATH environment variable accordingly. You may execute any of the scripts in the $MATLABPATH directory with no special action required. Advanced visualization applications such as MATLAB should be launched by TurboVNC on the Geyser and Caldera clusters. You can add the appropriate mexnc and snctools toolboxes by running "ncstartup" from the MATLAB command line. To add the m_map toolbox, run "m_map_startup." To add the deprecated, unsupported netcdf_toolbox, run "old_netcdf_startup" from the MATLAB command line. Use it at your own risk and start migrating to the new, supported, native netcdf interface. See http://www.mathworks.com/products/matlab/ for details.
matlab/R2015b This module makes MATLAB Version R2015b available to you and sets your MATLABPATH environment variable accordingly. You may execute any of the scripts in the $MATLABPATH directory with no special action required. Advanced visualization applications such as MATLAB should be launched by TurboVNC on the Geyser and Caldera clusters. You can add the appropriate mexnc and snctools toolboxes by running "ncstartup" from the MATLAB command line. To add the m_map toolbox, run "m_map_startup." To add the deprecated, unsupported netcdf_toolbox, run "old_netcdf_startup" from the MATLAB command line. Use it at your own risk and start migrating to the new, supported, native netcdf interface. See http://www.mathworks.com/products/matlab/ for details.
mercurial/2.4.1 This module loads the software version control tool Mercurial version 2.4.1 compiled using GNU compiler version 4.7.2. It will place the Mercurial executables in your PATH. See http://www.selenic.com/mercurial/ for details.
mpitest/mpitest This module loads experimental mpi module paths
mpitrace/1.0 This module enables automatic tracing of MPI calls at runtime. The tracing library is lightweight and easy to use. It is suitable for large MPI jobs with many tasks. To use: In your LSF batch script do: module load mpitrace prior to the mpirun.lsf command. After the job completes there will be four files in the run directory: mpi_profile.0 -- Communication statistics for MPI task 0 and summary statistics for all tasks. mpi_profile. -- Communication statistics for MPI task id with minimum communication time. mpi_profile. -- Communication statistics for MPI task id with median communication time. mpi_profile. -- Communication statistics for MPI task id with maximum communication time.
ncarbinlibs/1.0 This module loads default NCAR binary and library path executables in your PATH, and also updates these environment variables: INC_NCAR: - Will add the correct include path flags for the lib headers and module files LIB_NCAR: - Will add the correct link and rpath commands to use the shared libraries in your programs
ncarbinlibs/1.1 This module loads default NCAR binary and library path executables in your PATH, and also updates these environment variables: INC_NCAR: - Will add the correct include path flags for the lib headers and module files LIB_NCAR: - Will add the correct link and rpath commands to use the shared libraries in your programs
ncarenv/1.0 This module sets up the default NCAR environment, mostly for better performance.
ncarenv/1.1 This module sets up the default NCAR environment, mostly for better performance.
ncdump-json/r13 This module loads the ncdump-json program, which is a modified version of the ncdump utility that supports output in JSON format by using the -j flag. Example: $ ncdump-json -h -j tests/socib-buoy.nc {"dimensions":{"time":3169},"variables":{"time":{"type":"double","dimensions":["time"],... It behaves exactly like the original ncdump if you omit the command-line -j option.
nco/4.2.0 This module loads the NCO 4.2.0 package compiled with GNU compiler 4.4.6. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.2.3 This module loads the NCO 4.2.3 package compiled with GNU compiler 4.7.2. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.3.2 This module loads the NCO 4.3.2 package compiled with GNU compiler 4.7.2. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.3.4 This module loads the NCO 4.3.4 package compiled with GNU compiler 4.7.2. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.3.7 This module loads the NCO 4.3.7 package compiled with GNU compiler 4.7.2. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.4.2 This module loads the NCO 4.4.2 package compiled with GNU compiler 4.7.2. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.4.4 This module loads the NCO 4.4.4 package compiled with GNU compiler 4.7.2. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.5.1 This module loads the NCO 4.5.1 package compiled with GNU compiler 4.7.2. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.5.3 This module loads the NCO package. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.5.5 This module loads the NCO package. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.5.5wncdf4.4.0 This module loads the NCO package. It will place the NCO executables in your PATH. See http://nco.sourceforge.net/ for details.
nco/4.6.9 The NCO toolkit manipulates and analyzes data stored in netCDF-accessible formats, including DAP, HDF4, and HDF5. Software website - http://nco.sourceforge.net/ Built on Mon Oct 2 16:45:41 MDT 2017 Modules used: ncarenv/1.0 ncarbinlibs/1.1 gnu/4.8.2 netcdf/4.4.0
ncview/2.1.1 This module loads the Ncview Version 2.1.1 package compiled with GNU compiler 4.4.6. It will place the Ncview executables in your PATH. See http://meteora.ucsd.edu/~pierce/ncview_home_page.html for details.
ncview/2.1.7 This module loads the Ncview Version 2.1.7 package compiled with GNU compiler 4.8.2. It will place the Ncview executables in your PATH. See http://meteora.ucsd.edu/~pierce/ncview_home_page.html for details.
octave/3.8.2 This module loads the Octave Version 3.8.2 package. It will place the octave executables in your PATH. See http://www.octave.org/ for more information. After you load the module, run "octave" to use the command line interface or "octave --force-gui" to start the GUI. Only a small set of packages is installed, so if you need a different package send a request to cislhelp@ucar.edu.
octave/4.0.0 This module loads the Octave version 4.0.0 package. It will place the octave executables in your PATH. See http://www.octave.org/ for more information. For a list of installed packages, run "pkg list" at your Octave command line prompt. Only a small set of packages is installed, so if you need a different package send a request to cislhelp@ucar.edu.
openjdk/1.6.0 This module loads the icedtea-openjdk 2.3.14 package compiled with GNU compiler 4.4.7. This include jdk-1.6.0. It will place the java executables in your PATH. See http://icedtea.classpath.org/ for details.
pandoc/1.16.0.2 This module loads the Pandoc universal document converter. It is used to convert files from one markup format to another. See http://pandoc.org/ for details.
parallel/20140422 This module loads the GNU Parallel 20140422 package. It will place the GNU Parallel executables in your PATH. See http://www.gnu.org/software/parallel/ for details.
paraview/3.98.0-serial This module loads the ParaView Version 3.98.0(serial) package. It will place the Paraview executables in your PATH, and also update the environment variables. Advanced visualization applications such as Paraview should be launched by TurboVNC on the Geyser or Caldera cluster. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.paraview.org/ for details.
paraview/3.98.1-serial This module loads the ParaView 3.98.1(serial) package. It will place the ParaView executables in your PATH, and also update the environment variables. Advanced visualization applications such as ParaView should be launched by TurboVNC on the Geyser or Caldera cluster. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.paraview.org/ for details.
paraview/4.0.1 This module loads the ParaView 4.0.1(serial) package. It will place the ParaView executables in your PATH, and also update the environment variables. Advanced visualization applications such as ParaView should be launched by TurboVNC on the Geyser or Caldera cluster. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.paraview.org/ for details.
perlmods/5.0 This module loads some Perl modules that users often need but that are not available by default in the Red Hat Linux distro. To load the module, run: module load perlmods/5.0 Then run: instmodsh That command will prompt you for further input. Enter "l" to get a list of installed Perl modules. If you do not find the module(s) you need, please file a ticket by sending a list of the modules you need to cislhelp@ucar.edu. We will do our best to get them for you. See http://www.cpan.org/modules/index.html for more information about Perl modules.
php/5.5.7 PhP is an interpreted language used primarily for developing Web-based applications. See http://us1.php.net for more information. Visit the CISL web site at https://www2.cisl.ucar.edu/cisl-support for more information about CISL resources. If you have questions or concerns about the module utility, contact the CISL Consulting Services Group by email (cislhelp@ucar.edu) or by phone (303-497-2400).
pypy/1.9 This module loads the PyPy package compiled with the GNU compiler. PyPy is a fast, compliant alternative implementation of the Python language. See http://www.pypy.org/ for details.
pypy/2.0-beta1 This module loads the PyPy package compiled with the GNU compiler. PyPy is a fast, compliant alternative implementation of the Python language. See http://www.pypy.org/ for details.
pypy/2.0.2 This module loads the PyPy package compiled with the GNU compiler. PyPy is a fast, compliant alternative implementation of the Python language. See http://www.pypy.org/ for details.
python/2.7.3-gs Python version 2.7.3 compiled with the GNU compiler. This module places the Python executables in your PATH, including some libraries such as Pygments, nose and Docutils. Advanced libraries such as NumPy, SciPy, and matplotlib are not included automatically but can be loaded with the all-python-libs module or loaded individually.
python/2.7.5 Python version 2.7.5 compiled with the GNU compiler. This module places the Python executables in your PATH, including some libraries such as Pygments, nose and Docutils. Advanced libraries such as NumPy, SciPy, and matplotlib are not included automatically but can be loaded with the all-python-libs module or loaded individually.
python/2.7.6 Python version 2.7.6 compiled with the GNU compiler. This module places the Python executables in your PATH, including some libraries such as Pygments, nose and Docutils. Advanced libraries such as NumPy, SciPy, and matplotlib are not included automatically but can be loaded with the all-python-libs module or loaded individually.
python/2.7.7 Python version 2.7.7 compiled with the GNU compiler. This module places the Python executables in your PATH, including some libraries such as Pygments, nose and Docutils. Advanced libraries such as NumPy, SciPy, and matplotlib are not included automatically but can be loaded with the all-python-libs module or loaded individually.
subversion/1.8.9 This module loads version 1.8.9 of the Subversion version control system. Subversion is developed as a project of the Apache Software Foundation. See http://subversion.apache.org for more information.
swift/0.95-RC6 This module loads the Swift Version 0.95-RC6 package and sets the required environment variables. See http://swift-lang.org/main/ for details. Please note that this is a beta version.
tau-pdt/3.22 Program Database Toolkit (PDT) is a framework for analyzing source code written in several programming languages and for making rich program knowledge accessible to developers of static and dynamic analysis tools. PDT implements a standard program representation, the program database (PDB), that can be accessed in a uniform way through a class library supporting common PDB operations.
tau/2.25.1/intel12-icpc-pdt TAU Performance System® is a portable profiling and tracing toolkit for performance analysis of parallel programs written in Fortran, C, C++, UPC, Java, Python. TAU (Tuning and Analysis Utilities) is capable of gathering performance information through instrumentation of functions, methods, basic blocks, and statements as well as event-based sampling. All C++ language features are supported including templates and namespaces. The API also provides selection of profiling groups for organizing and controlling instrumentation. The instrumentation can be inserted in the source code using an automatic instrumentor tool based on the Program Database Toolkit (PDT), dynamically using DyninstAPI, at runtime in the Java Virtual Machine, or manually using the instrumentation API.
tau/2.25.1/intel12-mpich2-icpc-mpi-pdt TAU Performance System® is a portable profiling and tracing toolkit for performance analysis of parallel programs written in Fortran, C, C++, UPC, Java, Python. TAU (Tuning and Analysis Utilities) is capable of gathering performance information through instrumentation of functions, methods, basic blocks, and statements as well as event-based sampling. All C++ language features are supported including templates and namespaces. The API also provides selection of profiling groups for organizing and controlling instrumentation. The instrumentation can be inserted in the source code using an automatic instrumentor tool based on the Program Database Toolkit (PDT), dynamically using DyninstAPI, at runtime in the Java Virtual Machine, or manually using the instrumentation API.
tau/2.25.1/intel15-icpc-pdt TAU Performance System® is a portable profiling and tracing toolkit for performance analysis of parallel programs written in Fortran, C, C++, UPC, Java, Python. TAU (Tuning and Analysis Utilities) is capable of gathering performance information through instrumentation of functions, methods, basic blocks, and statements as well as event-based sampling. All C++ language features are supported including templates and namespaces. The API also provides selection of profiling groups for organizing and controlling instrumentation. The instrumentation can be inserted in the source code using an automatic instrumentor tool based on the Program Database Toolkit (PDT), dynamically using DyninstAPI, at runtime in the Java Virtual Machine, or manually using the instrumentation API.
tau/2.25.1/intel15-mpich2-icpc-mpi-pdt TAU Performance System® is a portable profiling and tracing toolkit for performance analysis of parallel programs written in Fortran, C, C++, UPC, Java, Python. TAU (Tuning and Analysis Utilities) is capable of gathering performance information through instrumentation of functions, methods, basic blocks, and statements as well as event-based sampling. All C++ language features are supported including templates and namespaces. The API also provides selection of profiling groups for organizing and controlling instrumentation. The instrumentation can be inserted in the source code using an automatic instrumentor tool based on the Program Database Toolkit (PDT), dynamically using DyninstAPI, at runtime in the Java Virtual Machine, or manually using the instrumentation API.
tau/2.25.1/intel16-icpc-pdt TAU Performance System® is a portable profiling and tracing toolkit for performance analysis of parallel programs written in Fortran, C, C++, UPC, Java, Python. TAU (Tuning and Analysis Utilities) is capable of gathering performance information through instrumentation of functions, methods, basic blocks, and statements as well as event-based sampling. All C++ language features are supported including templates and namespaces. The API also provides selection of profiling groups for organizing and controlling instrumentation. The instrumentation can be inserted in the source code using an automatic instrumentor tool based on the Program Database Toolkit (PDT), dynamically using DyninstAPI, at runtime in the Java Virtual Machine, or manually using the instrumentation API.
tau/2.25.1/intel16-mpich2-icpc-mpi-pdt TAU Performance System® is a portable profiling and tracing toolkit for performance analysis of parallel programs written in Fortran, C, C++, UPC, Java, Python. TAU (Tuning and Analysis Utilities) is capable of gathering performance information through instrumentation of functions, methods, basic blocks, and statements as well as event-based sampling. All C++ language features are supported including templates and namespaces. The API also provides selection of profiling groups for organizing and controlling instrumentation. The instrumentation can be inserted in the source code using an automatic instrumentor tool based on the Program Database Toolkit (PDT), dynamically using DyninstAPI, at runtime in the Java Virtual Machine, or manually using the instrumentation API.
tau/2.25.1/intel16-mpich2-icpc-mpi-python-pdt TAU Performance System® is a portable profiling and tracing toolkit for performance analysis of parallel programs written in Fortran, C, C++, UPC, Java, Python. TAU (Tuning and Analysis Utilities) is capable of gathering performance information through instrumentation of functions, methods, basic blocks, and statements as well as event-based sampling. All C++ language features are supported including templates and namespaces. The API also provides selection of profiling groups for organizing and controlling instrumentation. The instrumentation can be inserted in the source code using an automatic instrumentor tool based on the Program Database Toolkit (PDT), dynamically using DyninstAPI, at runtime in the Java Virtual Machine, or manually using the instrumentation API.
tcsh/6.18.01 This module loads the tcsh 6.18.01 package compiled with GNU compiler 4.8.2. It will place the tcsh executables in your PATH. See http://www.tcsh.org/Home for details.
texlive/2013 This module loads the TeXlive Version 2015 package compiled with GNU compiler 4.9.3. It will place the TexLive executables in your PATH. See /glade/apps/opt/texlive/2013/gnu/4.9.3/index.html for links to documentation. The TeX Live web site at http://tug.org/texlive contains updates and corrections. TeX Live is a joint project of the TeX user groups around the world; please consider supporting it by joining the group best for you. Go to http://tug.org/usergroups.html for a list of user groups.
texlive/2015 This module loads the TeXlive Version 2015 package compiled with GNU compiler 4.9.3. It will place the TexLive executables in your PATH. See /glade/apps/opt/texlive/2015/gnu/4.9.3/index.html for links to documentation. The TeX Live web site at http://tug.org/texlive contains updates and corrections. TeX Live is a joint project of the TeX user groups around the world; please consider supporting it by joining the group best for you. Go to http://tug.org/usergroups.html for a list of user groups.
texlive/2017 This module loads the TeXlive Version 2015 package compiled with GNU compiler 4.9.3. It will place the TexLive executables in your PATH. See /glade/apps/opt/texlive/2017/gnu/4.9.3/index.html for links to documentation. The TeX Live web site at http://tug.org/texlive contains updates and corrections. TeX Live is a joint project of the TeX user groups around the world; please consider supporting it by joining the group best for you. Go to http://tug.org/usergroups.html for a list of user groups.
totalview/8.11.0-0 This module loads the TotalView Version 8.11.0-0 package. It will place the TotalView executables in your PATH. See https://www2.cisl.ucar.edu/resources/yellowstone/code_dev/debugging for details.
totalview/8.12.0-1 This module loads the TotalView Version 8.12.0-1 package. It will place the TotalView executables in your PATH. See https://www2.cisl.ucar.edu/resources/yellowstone/code_dev/debugging for details.
totalview/8.14.0-16 This module loads the TotalView Version 8.14.0-16 package. It will place the TotalView executables in your PATH. See https://www2.cisl.ucar.edu/resources/yellowstone/code_dev/debugging for details.
vapor/2.2.0 This module loads the VAPOR 2.2.0 package. It will place the VAPOR executables in your PATH, and also update the environment variables. Advanced visualization applications such as VAPOR should be launched by TurboVNC on the Geyser and Caldera clusters. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.vapor.ucar.edu/ for details.
vapor/2.2.0.RC1 This module loads the VAPOR Version 2.2.0.RC1 package. It will place the VAPOR executables in your PATH, and also update the environment variables. Advanced visualization applications such as VAPOR should be launched by TurboVNC on the Geyser and Caldera clusters. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.vapor.ucar.edu/ for details.
vapor/2.2.2 This module loads the VAPOR 2.2.2 package. It will place the VAPOR executables in your PATH, and also update the environment variables. Advanced visualization applications such as VAPOR should be launched by TurboVNC on the Geyser and Caldera clusters. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.vapor.ucar.edu/ for details.
vapor/2.2.4 This module loads the VAPOR 2.2.4 package. It will place the VAPOR executables in your PATH, and also update the environment variables. Advanced visualization applications such as VAPOR should be launched by TurboVNC on the Geyser and Caldera clusters. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.vapor.ucar.edu/ for details.
vapor/2.3.0 This module loads the VAPOR 2.3.0 package. It will place the VAPOR executables in your PATH, and also update the environment variables. Advanced visualization applications such as VAPOR should be launched by TurboVNC on the Geyser and Caldera clusters. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.vapor.ucar.edu/ for details.
vapor/2.4.0 This module loads the VAPOR 2.4.0 package. It will place the VAPOR executables in your PATH, and also update the environment variables. Advanced visualization applications such as VAPOR should be launched by TurboVNC on the Geyser and Caldera clusters. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.vapor.ucar.edu/ for details.
vapor/2.4.0.RC0 This module loads the VAPOR 2.4.0.RC0 package. It will place the VAPOR executables in your PATH, and also update the environment variables. Advanced visualization applications such as VAPOR should be launched by TurboVNC on the Geyser and Caldera clusters. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and http://www.vapor.ucar.edu/ for details.
vapor/2.5.0 This module loads the VAPOR 2.5.0 package. It will place the VAPOR executables in your PATH, and also update the environment variables. Advanced visualization applications such as VAPOR should be launched by TurboVNC on the Geyser and Caldera clusters. See "Running visualization programs" on the CISL website for details.
vapor/2.6.0 This module loads the VAPOR package. It will place the VAPOR executables in your PATH, and also update the environment variables. Advanced visualization applications such as VAPOR should be launched by TurboVNC on the Geyser and Caldera clusters. See "Running visualization programs" on the CISL website for details.
vasp/5.3 This module loads VASP version 5.3. See https://www.vasp.at/ for details.
vim/7.4.2031 vi 7.4.2031 built with the gnu compiler 6.1.0.
vim/8.0 vi 8.0 built with the gnu compiler 4.8.2.
visit/2.12.0 VisIt is an Open Source, interactive, scalable, visualization, animation and analysis tool. Advanced visualization applications such as VisIt should be launched by TurboVNC on the Geyser or Caldera cluster. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization for details. Software website - https://wci.llnl.gov/simulation/computer-codes/visit/ Built on Tue Dec 20 16:53:30 MST 2016 Modules used: gnu/4.8.2
visit/2.6.2 This module loads VisIt Version 2.6.2 precompiled and puts the VisIt executables in your PATH. Advanced visualization applications such as VisIt should be launched by TurboVNC on the Geyser or Caldera cluster. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and https://wci.llnl.gov/codes/visit/home.html for details.
visit/2.7.3 This module loads VisIt Version 2.7.3 precompiled and puts the VisIt executables in your PATH. Advanced visualization applications such as VisIt should be launched by TurboVNC on the Geyser or Caldera cluster. See http://www2.cisl.ucar.edu/resources/geyser_caldera/visualization and https://wci.llnl.gov/codes/visit/home.html for details.
workshop/1.0 Load modules used in Performance Tool tutorials Apr 2013
python/2.7.3-deprecated This module places the Python executables in your PATH and loads the default versions of commonly used packages such as NumPy, SciPy, and matplotlib.
python/2.7.3-dev-deprecated This module loads the python-devel 2.7.3 package. The main differences from the normal Python 2.7.3 package are: 1) It includes libpython2.7.so (shared object) for linking, besides the libpython2.7.a (the default, static archive). 2) Some optional libraries may not have been installed, but can be per user's request. 3) It has been compiled with GCC 4.7.2 instead of 4.7.1 (which should not create any noticeable difference).